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| - University General Office |
| - Student Affairs Office |
| - Labor Union |
| - Security Office |
| - Academic Affairs Office |
| - Graduate School Office |
| - Office of Scientific & Technological Research |
| - Personnel Office |
| - Retired Personnel Affairs Office |
| - Financial Affairs Office |
| - Office of State-owned Assets Management |
| - Logistics Affairs Office |
| - Office of Campus Construction |
| - Internal Audit Office |
| - Foreign Affairs Office (Office of Taiwan, Hong Kong and Macao Affairs) |
| - External Liaison Office (Alumni Affairs Office/ Foundation Office) |
| - Intellectual Property Management Office |
| - Property&Production Management Office |
| - Center of Modern Education Technology and Network Administration |
| - Strait Business Incubation Center |
| - FAFU Libraries |
| - FAFU Journal Editorial Department |
| - Editorial Department of Huadong Insect Journal |
| - Physical Education Department |
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